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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000316.1_1921_2174_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1921 - 2174

Intron Length:

254

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGA|GTAATGCTG

5'SS Class:

weak_major

3'SS Sequence:

TCTTCTCCACCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCACAT

U12 Branch Point Sequence:

TCTTCTCCACCA

Flanking Amino Acid:

QRDEEKECKWKSSPHGMGRK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

58.3

0.2

1.2

50.9

45.6

Major BPS

52.8

0.07

1.1

60.5

36.2

Major PPT

77.4

0.62

0.8

70.9

34.6

Minor 5ss

35.7

-1.6

3.4

44.2

44.3

Minor BPS

46.7

-0.2

2.1

63.87

42.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013655

Chromosome:

PEDO01000316.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014227

1833 - 4384

2552