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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000316.1_3684_3813_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3684 - 3813

Intron Length:

130

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAAAGAT

5'SS Class:

major

3'SS Sequence:

CCTTTCTGCTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGCCAC

U12 Branch Point Sequence:

TTTGCCACAACA

Flanking Amino Acid:

CSRPNNYVLWRFLQALSIFC

Intron Amino Acid Position:

202

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.6

0.67

0.9

73.6

30.2

Major BPS

52.3

0.06

1.4

64.2

Major PPT

77.1

0.61

0.9

32.5

Minor 5ss

-2.8

3.4

37.5

47.2

Minor BPS

58.6

0.26

76.88

39.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013655

Chromosome:

PEDO01000316.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014227

1833 - 4384

2552