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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000324.1_557_700_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

557 - 700

Intron Length:

144

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTATGGGG

5'SS Class:

major

3'SS Sequence:

GGCCATGGGTGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGGCCAT

U12 Branch Point Sequence:

GGCTGGCTATGG

Flanking Amino Acid:

RGGCGSGCGTGYRTSYGAGY

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.4

0.34

1.3

52.7

44.2

Major BPS

48.8

-0

1.5

58.2

48.3

Major PPT

40.7

-0.5

1.7

37.9

44.1

Minor 5ss

-2.9

3.2

30.5

42.7

Minor BPS

27.7

-1.8

2.4

28.82

41.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027379

Chromosome:

PEDO01000324.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038319

287 - 752

466