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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000349.1_281_3266_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

281 - 3266

Intron Length:

2986

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

TCT|GCATGAAAA

5'SS Class:

weak_major

3'SS Sequence:

CTCACCTGCTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTCAC

U12 Branch Point Sequence:

TGCATCTCACCT

Flanking Amino Acid:

SNNYKKTTPSLSPFTVVRLQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

51.8

0.04

1.5

53.8

38.9

Major BPS

76.2

0.65

0.9

77.4

26.5

Major PPT

67.1

0.39

0.9

64.6

36.3

Minor 5ss

31.5

-2.1

49.3

46.7

Minor BPS

47.7

-0

1.9

65.2

45.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027385

Chromosome:

PEDO01000349.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021536

242 - 4393

4152