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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000352.1_188_271_R

Intron Information:

Intron Rank:

137684

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

188 - 271

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTGAGTAGG

5'SS Class:

strong_major

3'SS Sequence:

GCCGGCCCCACAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CCGCTAT

U12 Branch Point Sequence:

CTCCCCGCTATG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.3

0.74

69.1

43.2

Major BPS

43.6

-0.4

1.4

35.8

41.3

Major PPT

58.7

0.2

0.9

49.2

34.3

Minor 5ss

30.2

-2.3

2.6

34.3

41.4

Minor BPS

37.4

-1.1

2.3

40.6

43.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021580

Chromosome:

PEDO01000352.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044038

21 - 984

964