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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000370.1_61_2381_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

61 - 2381

Intron Length:

2321

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GGG|GCATTCTGC

5'SS Class:

weak_major

3'SS Sequence:

CCTGTACAAAAAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ATTTGAC

U12 Branch Point Sequence:

CCTGCTGTAAAA

Flanking Amino Acid:

GRRQALPRCGKTGELLGIGI

Intron Amino Acid Position:

323

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

55.2

0.12

1.4

45.7

46.5

Major BPS

77.7

0.69

0.9

69.1

37.9

Major PPT

49.8

-0

1.1

36.6

Minor 5ss

39.6

-1.2

3.9

50.2

46.4

Minor BPS

45.5

-0.3

2.2

55.33

44.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025088

Chromosome:

PEDO01000370.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030248

1 - 3819

3819