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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000393.1_1006_1215_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1006 - 1215

Intron Length:

210

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTTTCTAT

5'SS Class:

weak_major

3'SS Sequence:

CACCAATTGCAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ATTGCAA

U12 Branch Point Sequence:

GGATCCTGCACC

Flanking Amino Acid:

GTCKSCTHCKVPRRSCTPCK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

60.5

0.25

1.2

61.6

39.3

Major BPS

0.18

1.3

69.4

37.7

Major PPT

-0

1.2

44.8

40.1

Minor 5ss

-0.2

2.5

65.4

45.8

Minor BPS

50.7

1.9

62.26

42.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028402

Chromosome:

PEDO01000393.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022143

523 - 1266

744