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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000404.1_2039_2786_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

2039 - 2786

Intron Length:

748

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CAA|GCAAAAGTG

5'SS Class:

major

3'SS Sequence:

CCCCTGACTGGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AATTGAT

U12 Branch Point Sequence:

TTGCTTTGAAAT

Flanking Amino Acid:

REGRNRDSPYKQVYIDYLKE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.9

0.42

1.2

67.5

40.6

Major BPS

79.8

0.74

0.9

69.4

37.7

Major PPT

48.7

-0

1.7

53.7

35.3

Minor 5ss

24.8

-2.9

4.3

37.9

41.4

Minor BPS

53.4

0.19

1.5

71.15

39.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029119

Chromosome:

PEDO01000404.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042642

2001 - 3873

1873