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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000404.1_3586_3831_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3586 - 3831

Intron Length:

246

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CAA|GCAACTCCT

5'SS Class:

major

3'SS Sequence:

TCTAGTATGGAAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GTTTGAA

U12 Branch Point Sequence:

GAAGTTTGAAGA

Flanking Amino Acid:

YRTSKRKPTQIVDPIMRGQP

Intron Amino Acid Position:

280

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.8

0.49

1.3

72.7

38.4

Major BPS

69.4

0.48

1.2

63.4

44.3

Major PPT

55.3

0.12

1.2

56.8

42.4

Minor 5ss

33.8

-1.8

51.5

39.1

Minor BPS

43.3

-0.5

1.7

46.28

36.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029119

Chromosome:

PEDO01000404.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042642

2001 - 3873

1873