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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000461.1_2720_3458_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

2720 - 3458

Intron Length:

739

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

ATG|GCATGGATG

5'SS Class:

major

3'SS Sequence:

CTACTACATGGAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ACTACAT

U12 Branch Point Sequence:

TACACCTTCAGC

Flanking Amino Acid:

SGFTFSSYNMWVRQAPGKGL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.3

0.55

1.2

68.3

42.8

Major BPS

61.4

0.28

1.1

36.5

Major PPT

48.9

-0

1.7

55.3

39.2

Minor 5ss

31.8

-2.1

4.1

44.5

44.7

Minor BPS

48.5

-0.1

2.1

59.95

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028585

Chromosome:

PEDO01000461.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033088

2285 - 4096

1812