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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000461.1_2804_3299_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

2804 - 3299

Intron Length:

496

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AAG|GCCGAAGAC

5'SS Class:

major

3'SS Sequence:

AGGAAGGACAGAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GAAGGAC

U12 Branch Point Sequence:

CCGCCCGCAGCC

Flanking Amino Acid:

MNSLKSGGLVSPGGS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.2

0.38

1.2

58.5

Major BPS

39.8

-0.6

1.3

29.1

33.9

Major PPT

38.2

-0.6

1.6

23.6

35.7

Minor 5ss

13.8

-4.2

3.7

23.1

37.6

Minor BPS

38.4

-0.9

2.2

43.56

44.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017986

Chromosome:

PEDO01000461.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037479

904 - 3314

2411