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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000461.1_650_4170_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

650 - 4170

Intron Length:

3521

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTT|GTACTGCTA

5'SS Class:

weak_major

3'SS Sequence:

GAGTGACAGGAAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GAGTGAC

U12 Branch Point Sequence:

AGCTGAGTGACA

Flanking Amino Acid:

EKLFLRWFTVLGFSECE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

50.2

1.2

48.3

41.6

Major BPS

48.3

-0.1

1.3

40.8

41.4

Major PPT

44.6

-0.3

1.2

35.4

39.6

Minor 5ss

35.9

-1.6

3.7

52.6

45.6

Minor BPS

39.3

-0.8

2.4

50.23

40.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022040

Chromosome:

PEDO01000461.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025130

184 - 4193

4010