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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000521.1_1318_1443_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1318 - 1443

Intron Length:

126

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTT|GTCAGCTTC

5'SS Class:

weak_major

3'SS Sequence:

GGGCTCCGGCCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTTGGAT

U12 Branch Point Sequence:

GCAGAGGGAAGG

Flanking Amino Acid:

LKLLDMIGNFAPSPPVPLWP

Intron Amino Acid Position:

104

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

56.2

0.15

1.4

58.8

41.2

Major BPS

59.1

0.23

1.4

60.7

45.9

Major PPT

51.2

0.03

1.1

42.9

43.3

Minor 5ss

46.4

-0.4

2.9

65.8

39.6

Minor BPS

24.6

-2

2.3

22.09

35.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008235

Chromosome:

PEDO01000521.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008619

106 - 3462

3357