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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000526.1_5950_6985_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5950 - 6985

Intron Length:

1036

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTCCT

5'SS Class:

strong_major

3'SS Sequence:

TGCCCTCCTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGCTCAG

U12 Branch Point Sequence:

CAGCCCAGAGCC

Flanking Amino Acid:

IIKDKHILAKIRWKYMIVDE

Intron Amino Acid Position:

120

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.97

0.8

80.5

33.9

Major BPS

47.4

-0.1

1.6

54.7

43.1

Major PPT

75.9

0.58

0.8

69.4

31.3

Minor 5ss

31.4

-2.1

2.9

42.1

44.5

Minor BPS

41.7

-0.6

1.8

47.36

41.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024781

Chromosome:

PEDO01000526.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048524

4171 - 7360

3190