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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000569.1_10915_11703_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

10915 - 11703

Intron Length:

789

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTTCATATG

5'SS Class:

weak_major

3'SS Sequence:

ATGTCATTTTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTAAAT

U12 Branch Point Sequence:

TAACCATTAAAT

Flanking Amino Acid:

YESIKLERHSGERPFQCNQC

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

58.2

0.19

1.2

60.1

44.2

Major BPS

73.5

0.58

79.3

29.4

Major PPT

66.6

0.37

1.1

69.1

40.6

Minor 5ss

34.1

-1.8

39.9

40.1

Minor BPS

58.9

0.36

1.7

75.09

40.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030402

Chromosome:

PEDO01000569.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021524

2669 - 11863

9195