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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000569.1_34344_36247_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

34344 - 36247

Intron Length:

1904

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GGA|GCAGGAGAT

5'SS Class:

weak_major

3'SS Sequence:

TCTTGTGTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTCAT

U12 Branch Point Sequence:

TTTACCTTATTC

Flanking Amino Acid:

RGWQRWNRTWINVYVKVFTN

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

58.5

0.2

1.3

60.2

41.6

Major BPS

91.2

1.02

0.7

91.7

20.2

Major PPT

0.72

0.9

76.3

37.7

Minor 5ss

21.7

-3.3

4.3

33.6

43.1

Minor BPS

69.7

0.6

1.6

79.16

36.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015113

Chromosome:

PEDO01000569.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037146

34289 - 37254

2966