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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000582.1_161_964_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

161 - 964

Intron Length:

804

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTGAGTGGG

5'SS Class:

major

3'SS Sequence:

CTCTCGCCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGAGCAC

U12 Branch Point Sequence:

CAGCCCTGAGCA

Flanking Amino Acid:

VYKLVPGLQESEEKRIREFY

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.1

0.45

1.1

56.9

42.6

Major BPS

45.3

-0.2

1.4

51.4

43.9

Major PPT

71.4

0.48

0.8

64.4

31.1

Minor 5ss

27.9

-2.5

27.6

37.5

Minor BPS

-0.1

1.7

55.26

43.1

Associated Gene:

Gene:

PCGF1

Ensembl Gene ID:

ENSAPLG00000025734

Chromosome:

PEDO01000582.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041220

58 - 1270

1213