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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000606.1_10244_10353_F


Intron Information:

Intron Rank:
2

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
10244 - 10353

Intron Length:
110

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTACGGCCG

5'SS Class:
major

3'SS Sequence:
CTCCCCCCTGCAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
GTCTCCC

U12 Branch Point Sequence:
TGTCCCGTCCCG

Flanking Amino Acid:
GSQNIVLNGKTIVMNDCIIR

Intron Amino Acid Position:
40

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
76.9
0.63
1.1
58.1
46.4

Major BPS
26.6
-1.4
4.1
57
41.8

Major PPT
76
0.59
0.7
69.2
24.6

Minor 5ss
30
-2.3
3.4
39.4
46

Minor BPS
33.3
-1.4
3.7
53.23
47.2

Associated Gene:

Gene:
DCTN5

Ensembl Gene ID:

Chromosome:
PEDO01000606.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

10046 - 12260
2215