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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000606.1_20263_20479_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20263 - 20479

Intron Length:

217

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTCTG

5'SS Class:

strong_major

3'SS Sequence:

TTCCTCTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAC

U12 Branch Point Sequence:

TGTCTTCTAACA

Flanking Amino Acid:

KPSERVAVRQEEAEDPACIP

Intron Amino Acid Position:

390

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.5

0.95

0.8

77.8

38.7

Major BPS

84.6

0.86

0.8

83.9

22.3

Major PPT

88.6

0.87

0.6

Minor 5ss

32.4

-2

40.4

45.7

Minor BPS

57.2

0.22

1.6

70.01

35.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010637

Chromosome:

PEDO01000606.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011109

17566 - 23083

5518