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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000606.1_21856_22133_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21856 - 22133

Intron Length:

278

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGATG

5'SS Class:

strong_major

3'SS Sequence:

TCTCTCCCTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GACTGAC

U12 Branch Point Sequence:

CTCTCCCTACAG

Flanking Amino Acid:

NGTVQINFFQDHTKVILCPL

Intron Amino Acid Position:

529

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.8

78.6

37.3

Major BPS

55.9

0.15

1.2

Major PPT

0.74

0.7

76.7

25.5

Minor 5ss

30.4

-2.2

3.2

38.7

46.6

Minor BPS

45.6

-0.4

2.1

52.92

47.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010637

Chromosome:

PEDO01000606.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011109

17566 - 23083

5518