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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000606.1_2677_2825_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2677 - 2825

Intron Length:

149

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCCTT

5'SS Class:

strong_major

3'SS Sequence:

ATCTGCTGTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAC

U12 Branch Point Sequence:

TCTCACTTACCT

Flanking Amino Acid:

VEVVSFSETGRSKHGQTLMP

Intron Amino Acid Position:

1186

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.2

0.85

0.9

77.8

38.7

Major BPS

0.87

0.8

85.6

Major PPT

72.6

0.51

69.5

41.1

Minor 5ss

38.4

-1.3

3.3

55.8

48.4

Minor BPS

59.5

0.38

1.9

78.43

43.5

Associated Gene:

Gene:

PALB2

Ensembl Gene ID:

ENSAPLG00000010279

Chromosome:

PEDO01000606.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028537

21 - 10153

10133

ENSAPLT00000010724

21 - 10153

10133