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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000606.1_27501_27864_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27501 - 27864

Intron Length:

364

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGCCCG

5'SS Class:

strong_major

3'SS Sequence:

TCCCCGTTTCCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCACAT

U12 Branch Point Sequence:

TCAGCCCTCAGT

Flanking Amino Acid:

IELCSATLQEYVESPSFNRR

Intron Amino Acid Position:

542

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.8

0.75

62.3

43.9

Major BPS

62.5

0.31

1.2

38.9

Major PPT

77.2

0.61

0.8

37.6

Minor 5ss

32.7

-2

39.3

46.1

Minor BPS

42.7

-0.4

2.3

60.86

48.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010981

Chromosome:

PEDO01000606.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011497

24920 - 36775

11856