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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000606.1_28055_28498_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

28055 - 28498

Intron Length:

444

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGTGGC

5'SS Class:

strong_major

3'SS Sequence:

GGTGTGCACACAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CCATCAC

U12 Branch Point Sequence:

ACTGCCATCACC

Flanking Amino Acid:

GHGAGGTFVFRGHFDGRSVA

Intron Amino Acid Position:

478

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

67.2

38.1

Major BPS

53.4

0.09

1.1

57.3

37.7

Major PPT

58.6

0.19

1.1

50.2

43.2

Minor 5ss

26.2

-2.7

3.2

34.3

Minor BPS

47.8

-0.1

2.1

61.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010981

Chromosome:

PEDO01000606.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011497

24920 - 36775

11856