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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000606.1_29445_30153_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

29445 - 30153

Intron Length:

709

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GCA|GCGAGGGGC

5'SS Class:

weak_major

3'SS Sequence:

CACCCGATGCCAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ACCCGAT

U12 Branch Point Sequence:

GCAGCCTCCACC

Flanking Amino Acid:

AVVLALWPRLHREQVEVYPE

Intron Amino Acid Position:

384

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

57.1

0.17

1.3

61.8

37.2

Major BPS

48.9

-0

1.3

46.1

38.7

Major PPT

55.4

0.12

1.1

46.4

39.9

Minor 5ss

-3.9

3.9

28.2

37.7

Minor BPS

45.3

-0.3

2.1

52.02

44.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010981

Chromosome:

PEDO01000606.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011497

24920 - 36775

11856