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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000606.1_31762_33171_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

31762 - 33171

Intron Length:

1410

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGGATG

5'SS Class:

major

3'SS Sequence:

AGGGGAGAAGCAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AAGTCAG

U12 Branch Point Sequence:

TCGTTGTGGACC

Flanking Amino Acid:

TGDIKWTLKDDHALNGGLGW

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.1

0.69

0.9

71.3

40.1

Major BPS

47.7

-0.1

1.6

55.1

42.1

Major PPT

45.6

-0.2

1.1

40.2

Minor 5ss

30.6

-2.2

3.2

36.5

41.9

Minor BPS

45.5

-0.3

2.2

57.22

42.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010981

Chromosome:

PEDO01000606.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011497

24920 - 36775

11856