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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000606.1_33115_37662_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

33115 - 37662

Intron Length:

4548

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCGAC

5'SS Class:

strong_major

3'SS Sequence:

GGGCTGTGAGCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGCTCAC

U12 Branch Point Sequence:

CTGCTCACAGCA

Flanking Amino Acid:

EQDQLWIGTKGAGAVPPPGE

Intron Amino Acid Position:

272

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.8

0.82

0.9

71.9

33.8

Major BPS

69.8

0.49

1.1

71.3

36.7

Major PPT

52.8

0.06

1.1

46.9

44.8

Minor 5ss

31.2

-2.2

3.3

40.1

46.3

Minor BPS

40.9

-0.6

1.9

49.65

41.2

Associated Gene:

Gene:

UBFD1

Ensembl Gene ID:

ENSAPLG00000021421

Chromosome:

PEDO01000606.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022508

32975 - 39922

6948