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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000606.1_3353_3859_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3353 - 3859

Intron Length:

507

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGGACA

5'SS Class:

strong_major

3'SS Sequence:

TTTGCTATTCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTGTAT

U12 Branch Point Sequence:

TGACTCTGTATT

Flanking Amino Acid:

GKVYTWQLGEIPVIQIIPLL

Intron Amino Acid Position:

1104

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

0.9

36.1

Major BPS

58.9

0.22

1.5

59.6

46.8

Major PPT

78.6

0.64

0.9

70.8

39.7

Minor 5ss

38.6

-1.3

49.3

46.7

Minor BPS

-0.1

1.7

63.73

40.4

Associated Gene:

Gene:

PALB2

Ensembl Gene ID:

ENSAPLG00000010279

Chromosome:

PEDO01000606.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028537

21 - 10153

10133

ENSAPLT00000010724

21 - 10153

10133