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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000606.1_38044_39174_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

38044 - 39174

Intron Length:

1131

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTGTGGGC

5'SS Class:

weak_major

3'SS Sequence:

TTTTACCTTGTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAC

U12 Branch Point Sequence:

GTTTCTGTAAAT

Flanking Amino Acid:

NKKEPLCRQKQHRKVLDKGK

Intron Amino Acid Position:

215

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

55.4

0.13

1.3

49.6

41.4

Major BPS

84.6

0.86

0.8

83.9

22.3

Major PPT

83.3

0.75

0.7

78.3

30.1

Minor 5ss

24.6

-2.9

3.4

33.3

Minor BPS

59.6

0.38

2.1

81.87

39.5

Associated Gene:

Gene:

UBFD1

Ensembl Gene ID:

ENSAPLG00000021421

Chromosome:

PEDO01000606.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022508

32975 - 39922

6948