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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000606.1_8739_9006_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8739 - 9006

Intron Length:

268

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGACCG

5'SS Class:

major

3'SS Sequence:

TTTTTCCCAACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTACAC

U12 Branch Point Sequence:

TTTTTCCCAACA

Flanking Amino Acid:

AEPGGRHSPAGSRGSKSPGA

Intron Amino Acid Position:

152

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.66

1.1

44.9

Major BPS

72.8

0.57

30.3

Major PPT

82.3

0.73

0.8

78.5

28.8

Minor 5ss

30.9

-2.2

3.3

39.5

45.9

Minor BPS

62.5

0.39

1.9

80.29

35.2

Associated Gene:

Gene:

PALB2

Ensembl Gene ID:

ENSAPLG00000010279

Chromosome:

PEDO01000606.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028537

21 - 10153

10133

ENSAPLT00000010724

21 - 10153

10133