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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000679.1_575_652_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

575 - 652

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTAAGGAGC

5'SS Class:

strong_major

3'SS Sequence:

CTGGTCCCTCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGCTAAT

U12 Branch Point Sequence:

CCCGCGCTAATC

Flanking Amino Acid:

QSRTQDPVPPETPSDSDHKK

Intron Amino Acid Position:

122

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

68.2

Major BPS

0.42

1.2

67.3

37.8

Major PPT

72.5

0.51

0.9

62.4

39.8

Minor 5ss

33.1

-1.9

3.2

43.9

43.7

Minor BPS

40.6

-0.7

2.3

45.63

Associated Gene:

Gene:

MED19

Ensembl Gene ID:

ENSAPLG00000025301

Chromosome:

PEDO01000679.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024200

21 - 1412

1392