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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000682.1_2632_2706_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2632 - 2706

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTGAGTTCC

5'SS Class:

strong_major

3'SS Sequence:

CTCCCCCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTCAC

U12 Branch Point Sequence:

CTCTGCTCACTC

Flanking Amino Acid:

LLLQGQASCPGLHSPPWRQL

Intron Amino Acid Position:

235

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

0.9

71.9

34.5

Major BPS

69.8

0.49

1.1

71.3

36.7

Major PPT

71.6

0.49

0.7

65.2

23.5

Minor 5ss

35.6

-1.6

2.8

36.8

40.4

Minor BPS

43.7

-0.4

2.1

53.52

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022168

Chromosome:

PEDO01000682.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023272

1198 - 3528

2331