Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000744.1_1638_1718_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1638 - 1718

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTGAGCCAC

5'SS Class:

major

3'SS Sequence:

CCCGTCCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCCCAA

U12 Branch Point Sequence:

CCGTCCCCAACC

Flanking Amino Acid:

CLPAFLLLGWGAPVLFVVPW

Intron Amino Acid Position:

281

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.9

0.56

1.1

59.3

41.8

Major BPS

50.5

0.01

1.3

60.6

37.4

Major PPT

0.4

0.8

29.2

Minor 5ss

32.3

-2

33.6

41.9

Minor BPS

-0

59.08

45.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023371

Chromosome:

PEDO01000744.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025191

21 - 6764

6744

ENSAPLT00000031121

21 - 4625

4605