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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000744.1_3427_3513_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3427 - 3513

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-CG

5'SS Sequence:

CAG|GTACCGGGG

5'SS Class:

major

3'SS Sequence:

GCCCCCCCCCCCG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GTGCTAC

U12 Branch Point Sequence:

TGGGTGCTACCC

Flanking Amino Acid:

LLALLLLLLFRPLRCTRNYI

Intron Amino Acid Position:

178

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.7

0.32

1.3

49.8

46.9

Major BPS

42.5

-0.4

1.4

35.9

42.7

Major PPT

37.8

-0.7

3.1

46.1

Minor 5ss

33.1

-1.9

3.7

46.9

48.5

Minor BPS

36.9

-1

2.3

46.55

42.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023371

Chromosome:

PEDO01000744.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025191

21 - 6764

6744

ENSAPLT00000031121

21 - 4625

4605