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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000744.1_5945_6039_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

5945 - 6039

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGGGGA

5'SS Class:

strong_major

3'SS Sequence:

GTGGCCAGTGCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CGGTGAC

U12 Branch Point Sequence:

CCCCCGGTGACG

Flanking Amino Acid:

APGTCPGTTEGGVVARRCGP

Intron Amino Acid Position:

106

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.9

73.1

38.2

Major BPS

47.5

-0.1

1.3

38.2

41.7

Major PPT

59.2

0.21

1.1

51.3

42.7

Minor 5ss

28.6

-2.5

3.5

46.8

Minor BPS

37.8

-1.1

2.5

39.08

44.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023371

Chromosome:

PEDO01000744.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025191

21 - 6764

6744