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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000766.1_1698_2508_R

Intron Information:

Intron Rank:

131116

Intron Class:

major

Intron Phase:

Intron Coordinates:

1698 - 2508

Intron Length:

811

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGGGC

5'SS Class:

strong_major

3'SS Sequence:

TTACCTTTGGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAAAAAC

U12 Branch Point Sequence:

TTACCCTTACCT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.9

73.9

36.8

Major BPS

52.9

0.07

1.1

59.6

32.7

Major PPT

75.6

0.58

72.9

37.1

Minor 5ss

29.6

-2.3

3.5

41.1

45.6

Minor BPS

71.8

0.76

1.6

86.67

38.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017763

Chromosome:

PEDO01000766.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046150

405 - 2783

2379