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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000780.1_480_1835_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

480 - 1835

Intron Length:

1356

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTCACGTGA

5'SS Class:

weak_major

3'SS Sequence:

GCTGGCAGCGCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTTAGAC

U12 Branch Point Sequence:

TGGCTTAGACAC

Flanking Amino Acid:

RREDEALAVSGAAWGPRGGG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

51.5

0.04

1.5

48.8

44.4

Major BPS

56.9

0.17

1.1

56.1

39.6

Major PPT

54.8

0.11

1.1

46.8

40.3

Minor 5ss

37.5

-1.4

3.2

47.6

47.9

Minor BPS

35.5

-1.1

1.6

39.18

32.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030513

Chromosome:

PEDO01000780.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046525

32 - 1954

1923