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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000781.1_1169_1268_R

Intron Information:

Intron Rank:

Intron Class:

minor-like

Intron Phase:

Intron Coordinates:

1169 - 1268

Intron Length:

100

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTGTCCTCT

5'SS Class:

weak_minor

3'SS Sequence:

GTGTCTGGGGCAG|C

3'SS Class:

degenerate_minor

U2 Branch Point Sequence:

AGCTCAG

U12 Branch Point Sequence:

TCTGCTGGAGCT

Flanking Amino Acid:

LGDGEWGVPRAERGRAQSGI

Intron Amino Acid Position:

568

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

54.9

0.12

1.2

41.7

Major BPS

48.8

-0

1.5

57.1

41.8

Major PPT

57.6

0.17

1.2

53.7

45.8

Minor 5ss

57.9

0.27

2.3

65.3

46.1

Minor BPS

42.6

-0.4

2.3

63.99

46.6

Associated Gene:

Gene:

TIE1

Ensembl Gene ID:

ENSAPLG00000009614

Chromosome:

PEDO01000781.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021592

24 - 5410

5387