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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000781.1_2809_2913_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2809 - 2913

Intron Length:

105

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTGGGCCCC

5'SS Class:

major

3'SS Sequence:

TTTTTGTTCACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGGTCAC

U12 Branch Point Sequence:

TTTTTGTTCACA

Flanking Amino Acid:

PEAVMVTECLEPTVKPVIEG

Intron Amino Acid Position:

347

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.9

0.54

1.1

56.7

42.7

Major BPS

59.8

0.24

1.3

63.1

44.5

Major PPT

0.85

0.7

83.5

31.6

Minor 5ss

32.3

-2

3.2

42.1

44.9

Minor BPS

55.5

0.17

2.4

78.35

38.8

Associated Gene:

Gene:

TIE1

Ensembl Gene ID:

ENSAPLG00000009614

Chromosome:

PEDO01000781.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021592

24 - 5410

5387

ENSAPLT00000021148

21 - 5469

5449

ENSAPLT00000010056

21 - 5469

5449