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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000781.1_342_561_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

342 - 561

Intron Length:

220

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTGAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

TCCCATCTGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACCTCAC

U12 Branch Point Sequence:

GTGCCCCTAACC

Flanking Amino Acid:

RRTFTYQSGSGEETILQFNS

Intron Amino Acid Position:

600

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

0.9

69.7

35.1

Major BPS

63.6

0.34

65.3

32.1

Major PPT

68.9

0.43

64.7

36.1

Minor 5ss

-2.4

3.1

36.8

40.4

Minor BPS

0.32

1.7

69.9

40.8

Associated Gene:

Gene:

TIE1

Ensembl Gene ID:

ENSAPLG00000009614

Chromosome:

PEDO01000781.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021592

24 - 5410

5387

ENSAPLT00000021148

21 - 5469

5449