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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000781.1_4566_4677_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4566 - 4677

Intron Length:

112

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACAGGGA

5'SS Class:

major

3'SS Sequence:

TCTCTTCCCACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATAGCAG

U12 Branch Point Sequence:

TCTCTTCCCACA

Flanking Amino Acid:

SGWSGSRCNQACPPGYYGPD

Intron Amino Acid Position:

108

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.3

0.46

1.1

57.5

41.7

Major BPS

42.3

-0.4

1.7

51.5

43.9

Major PPT

81.3

0.71

0.7

76.1

26.1

Minor 5ss

26.9

-2.7

3.7

38.1

46.8

Minor BPS

40.2

-0.7

52.85

39.6

Associated Gene:

Gene:

TIE1

Ensembl Gene ID:

ENSAPLG00000009614

Chromosome:

PEDO01000781.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021592

24 - 5410

5387

ENSAPLT00000021148

21 - 5469

5449

ENSAPLT00000010056

21 - 5469

5449