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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000781.1_5195_5301_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5195 - 5301

Intron Length:

107

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTGGG

5'SS Class:

strong_major

3'SS Sequence:

GCTCTCCCCGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GATAGAC

U12 Branch Point Sequence:

CACCCCACAGCC

Flanking Amino Acid:

WSAFYRLIVRACAAKKWGPS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.92

0.8

72.2

39.5

Major BPS

47.5

-0.1

1.2

44.4

38.7

Major PPT

72.3

0.5

0.8

65.6

30.3

Minor 5ss

26.6

-2.7

31.5

42.8

Minor BPS

-0.7

1.9

46.57

41.8

Associated Gene:

Gene:

TIE1

Ensembl Gene ID:

ENSAPLG00000009614

Chromosome:

PEDO01000781.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021592

24 - 5410

5387

ENSAPLT00000010056

21 - 5469

5449