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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000836.1_2212_2323_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2212 - 2323

Intron Length:

112

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCGCC

5'SS Class:

strong_major

3'SS Sequence:

TGCTTCTTCCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCTTCAA

U12 Branch Point Sequence:

CCCCCTTCAATT

Flanking Amino Acid:

VCAKVEAANKLEDPLEAFPV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

0.9

69.3

35.8

Major BPS

65.8

0.39

1.1

69.2

36.3

Major PPT

80.3

0.68

0.8

72.6

37.6

Minor 5ss

32.2

-2

3.3

41.8

45.1

Minor BPS

49.8

0.06

1.6

60.73

43.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003390

Chromosome:

PEDO01000836.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003448

1301 - 2663

1363