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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000836.1_2377_2587_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

2377 - 2587

Intron Length:

211

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTGAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

GCCCCCCTGCGAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTGTAAG

U12 Branch Point Sequence:

GACGCTGTAAGT

Flanking Amino Acid:

FPVFKKYDRNGPETPVFCPK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

69.3

35.8

Major BPS

49.2

-0

1.6

44.6

Major PPT

-0.2

1.7

45.7

36.6

Minor 5ss

28.1

-2.5

27.7

36.2

Minor BPS

-0.4

2.2

56.83

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003390

Chromosome:

PEDO01000836.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003448

1301 - 2663

1363