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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000869.1_1540_1620_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1540 - 1620

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GAG|GCGGCCCTG

5'SS Class:

major

3'SS Sequence:

CCACAAGTGTGAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCCACAA

U12 Branch Point Sequence:

TCTTCCACAAGT

Flanking Amino Acid:

TAVTDLGGIEQGADNGTGRG

Intron Amino Acid Position:

101

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.9

0.33

1.2

52.1

44.9

Major BPS

55.9

0.15

63.2

34.1

Major PPT

42.8

-0.4

1.7

42.4

41.8

Minor 5ss

29.9

-2.3

4.3

46.2

49.1

Minor BPS

52.2

0.15

2.1

77.18

Associated Gene:

Gene:

RDH5

Ensembl Gene ID:

ENSAPLG00000020015

Chromosome:

PEDO01000869.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018518

1102 - 2002

901