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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000870.1_1977_2087_F

Intron Information:

Intron Rank:

134570

Intron Class:

major

Intron Phase:

Intron Coordinates:

1977 - 2087

Intron Length:

111

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACAGGGC

5'SS Class:

major

3'SS Sequence:

TTTGTCTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACTGCAT

U12 Branch Point Sequence:

GCCCCATCGACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.8

0.44

1.1

40.8

Major BPS

53.6

0.09

1.4

65.3

41.5

Major PPT

86.7

0.82

0.7

81.5

30.6

Minor 5ss

27.8

-2.5

3.7

41.2

45.5

Minor BPS

45.8

-0.2

1.8

59.18

43.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022337

Chromosome:

PEDO01000870.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022333

128 - 2820

2693