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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000874.1_6609_6685_R


Intron Information:

Intron Rank:
6

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
6609 - 6685

Intron Length:
77

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTCTGTGCG

5'SS Class:
major

3'SS Sequence:
GTGGCTCCCCCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TGCCCAC

U12 Branch Point Sequence:
CCGCGCCCACCC

Flanking Amino Acid:
FQRSWREYKQGFGDAAGEHW

Intron Amino Acid Position:
283

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
71
0.5
1.3
62.4
42.4

Major BPS
48.9
-0
1.3
58.1
40.4

Major PPT
64.9
0.33
1
54.7
41.4

Minor 5ss
34.5
-1.8
2.9
41.8
44.9

Minor BPS
33.3
-1.2
2.1
36.07
40.8

Associated Gene:

Gene:
ANGPT4

Ensembl Gene ID:

Chromosome:
PEDO01000874.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

5595 - 9097
3503