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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000878.1_3223_3473_F

Intron Information:

Intron Rank:

136011

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3223 - 3473

Intron Length:

251

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTTATTTTT

5'SS Class:

major

3'SS Sequence:

TTTGGGACCGGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GGTTCAC

U12 Branch Point Sequence:

TTTTTTGGGACC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.5

0.63

1.2

81.9

Major BPS

57.1

0.18

1.3

63.1

44.5

Major PPT

47.8

-0.1

1.7

51.3

42.7

Minor 5ss

42.6

-0.8

2.8

59.6

44.7

Minor BPS

48.3

-0.1

2.1

69.32

36.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023261

Chromosome:

PEDO01000878.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042349

2700 - 4917

2218