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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000889.1_427_590_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

427 - 590

Intron Length:

164

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTCAGTGCT

5'SS Class:

major

3'SS Sequence:

CTGCTCCCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGCTGAC

U12 Branch Point Sequence:

CGGGGCTGACCC

Flanking Amino Acid:

TLNMKMVMPSWFDLMGLTPD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.7

0.56

1.3

71.5

38.5

Major BPS

49.4

-0

1.3

42.8

41.8

Major PPT

0.47

0.8

34.8

Minor 5ss

30.9

-2.2

3.1

39.4

Minor BPS

39.3

-0.8

2.1

43.13

44.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029813

Chromosome:

PEDO01000889.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046285

174 - 1490

1317