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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000897.1_1343_1712_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1343 - 1712

Intron Length:

370

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGACAC

5'SS Class:

strong_major

3'SS Sequence:

GCTGTTAATGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTAAT

U12 Branch Point Sequence:

ATGCTGTTAATG

Flanking Amino Acid:

DHPFYSTISKDRRYADLTED

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.4

0.83

0.9

71.2

34.5

Major BPS

84.4

0.85

34.5

Major PPT

69.3

0.43

62.8

42.2

Minor 5ss

26.8

-2.7

2.9

32.6

42.4

Minor BPS

-0.2

2.1

54.35

41.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016572

Chromosome:

PEDO01000897.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039267

47 - 1986

1940