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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01000898.1_2986_3544_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

2986 - 3544

Intron Length:

559

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

TGA|GCGCGGGCA

5'SS Class:

weak_major

3'SS Sequence:

GGGGGAGGCACAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTGTCAC

U12 Branch Point Sequence:

GGGGCGGGAAGG

Flanking Amino Acid:

SNAIWKKSQGEGGERPLGGC

Intron Amino Acid Position:

303

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

50.1

1.3

53.1

34.9

Major BPS

62.6

0.31

1.2

66.7

39.9

Major PPT

46.4

-0.2

1.1

30.5

40.8

Minor 5ss

13.9

-4.2

3.8

16.3

30.4

Minor BPS

29.3

-1.7

2.4

41.4

Associated Gene:

Gene:

ZNF414

Ensembl Gene ID:

ENSAPLG00000021517

Chromosome:

PEDO01000898.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044869

1125 - 3596

2472

ENSAPLT00000022164

454 - 3596

3143